Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KMVTYPNGDRHCVMAQGQVISACLQQANG-L-PHADCCYAINDVNRYVETIYGRLALCKCFQEILK---DSRFTKLIGMPEKCAIPNAVPFDPKTDCDRFVEHIWLKMF
1AFH Chain:A ((1-92))
--------AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV---------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49616 for 704 contacts (-70.5/contact) +
2D Compatibility (PS) -9052 + (NN) -3217 + (LL) 1496
1D Compatibility (HY) 0 + (ID) 900
Total energy: -61289.0 ( -87.06 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: