Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVASSLGPCLNYLKGAGGTAPSAACCNGVRGINSAAKTTADRQTACQCLKSAANGIPGLQPKLAESLPGNCNVNIPYKISLSTNCQSIK
1SIY Chain:A ((1-91))
MTCGQVQGNLAQCIGFLQKGG--VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSIN
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60864 for 700 contacts (-86.9/contact) +
2D Compatibility (PS) -9622 + (NN) -4577 + (LL) -120
1D Compatibility (HY) -9200 + (ID) 2350
Total energy: -86733.0 ( -123.90 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: