Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------ACNPSELMACASSILQSKPPTAQCCAKLKEQQPCFCQ----YKKDPSLKGYINPANFKKVAACRVQVPKC---------------------------------------------------------------
3QH6 Chain:A ((1-153))
SRMRAVLHLEHKRYFQNHGHILFEGLAPVSDCKQLEAELKLFLWRENVHRTLPGVQMIVKRVRLDHLAAELTHRSRVALVRDLWVQKQEEILFDDCDCSVLLCLSGEKAGWGLFFSGEYPQDVFDWGAGDTAIILRFSSA
General information:
TITO was launched using:
RESULT:
Template:
3QH6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3806 for 331 contacts (-11.5/contact) +
2D Compatibility (PS) -6941 + (NN) -2092 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -17239.0 ( -52.08 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3QH6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QH6-query.scw
PDB file :
Tito_Scwrl_3QH6.pdb
: