Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---VTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLCNYIKNPS-------LKQYVNSPGAKKVLSNCGVTYPNC
1E68 Chain:A ((1-70))
MAKEFGIPAAVAGTVLNVVEAGGWVTTIVSILTAVGSGGLSLLAAAGRESIKAYLKKEIKKKGKRAVIAW--------
General information:
TITO was launched using:
RESULT:
Template:
1E68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14856 for 388 contacts (-38.3/contact) +
2D Compatibility (PS) -6072 + (NN) -2126 + (LL) 56
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -25848.0 ( -66.62 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_1E68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E68-query.scw
PDB file :
Tito_Scwrl_1E68.pdb
: