Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERN--LLVNACRPVIYGR-S-------------PSADCCQRVRVSHVECVCPYVTPKTASIIGV----IGVDNVVKKIEGCGRTVPRKFKCGSITTP
1S6D Chain:A ((9-97))
----SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20514 for 494 contacts (-41.5/contact) +
2D Compatibility (PS) -6468 + (NN) 4151 + (LL) 244
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -26687.0 ( -54.02 by residue)
QMean score : 0.143
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: