Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATICNIDTSKLAECLPAVSGR----SPP-------PPTKACCTALLSADLHCLCNYKSALP-A-F-G----INPALAMALPKKCGGSLPPNCKVDAEP
1S6D Chain:A ((19-97))
--------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-----------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27219 for 394 contacts (-69.1/contact) +
2D Compatibility (PS) -6478 + (NN) -2019 + (LL) 716
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -38850.0 ( -98.60 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: