Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
INCDNDLI--GLASKCQKYVVKQ----GSSA------KPSPECCKVVKNVNVPCVCSHVTKQIEDLI-------SMKKVFDVAKSCGKKVTPGTKCGSYTVPN
1S6D Chain:A ((11-97))
--CYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23644 for 455 contacts (-52.0/contact) +
2D Compatibility (PS) -6732 + (NN) -384 + (LL) 144
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -36816.0 ( -80.91 by residue)
QMean score : 0.260
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: