Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGLSPSQCKQEQT--LGVNACRDILLG-----KAP----------SPACCGRVRVSHVECICPAITPKLASLI-------------NVKQAIKLLQDCGRKVPRHFKCGSLNFP
2LVF Chain:A ((2-101))
-AEAQEECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS-------------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21513 for 422 contacts (-51.0/contact) +
2D Compatibility (PS) -7286 + (NN) -653 + (LL) 480
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -32222.0 ( -76.36 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: