Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVSISGLTSCSPAVTPP----NPA-------PPTSACCSALSHADLRCLCSYKNSTLLPSL-G----IDQKLPLKLPEKCRLPHRAPC
1S6D Chain:A ((19-101))
--------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMS-QPC
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22707 for 437 contacts (-52.0/contact) +
2D Compatibility (PS) -6966 + (NN) -987 + (LL) 740
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -35070.0 ( -80.25 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: