Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQQVSACQNDIDALWRSCKQFVQKEGPKMPPSEDCCKTIKAL---DAHASCICDYVGSPDARNKLDLDKVF-FVTKQCGVTVPKG--CGSKQD
1HYP Chain:A ((25-79))
-------------------------------VDDCCALIGGLGDIEA-IVCLCIQL--RAL-GILNLNRNLQLILNSCGRSYPSNATCPR---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23344 for 257 contacts (-90.8/contact) +
2D Compatibility (PS) -4997 + (NN) -1365 + (LL) 1752
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -33854.0 ( -131.73 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: