Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNKDCICNALR---A--------ATTFTTTCNLPSLDCGIT
1L6H Chain:A ((2-69))
-GCNAG--QLTVCTGAIAGGA---RPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH--
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34727 for 410 contacts (-84.7/contact) +
2D Compatibility (PS) -5823 + (NN) -2775 + (LL) 416
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -46459.0 ( -113.31 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: