Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEA--WKLAPCEAAAQNEKAA-----------------PSKSCCLQVKKIGQNPDCLCAVMLSNTAK---S-SG--I---KPEVAVTIPKRCNLADRPVGYKCGGLFPFITLPLVFAS
1W2Q Chain:A ((16-112))
--------CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12870 for 444 contacts (-29.0/contact) +
2D Compatibility (PS) -7249 + (NN) -3790 + (LL) 976
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -28283.0 ( -63.70 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: