Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVA--LKLAPCAAATQNPRAA-----------------VPPSCCAQVRAIGRVPKCLCAVMLSDTA---RKA-G--V---KPAVAMTIPKRCAIANRPVGYKCGPYTLP
1W2Q Chain:A ((16-117))
--------CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--APQRC-------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32584 for 471 contacts (-69.2/contact) +
2D Compatibility (PS) -7352 + (NN) 858 + (LL) 56
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -43122.0 ( -91.55 by residue)
QMean score : 0.257
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: