Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTTTPDKEA--FKLAPCASAAQDENAS-----------------VSSQCCAKVKRIEQNPACLCAVMLSNTA------KS--S-GIDPEIAMTIPKRCNIADRPVGYKCGAYTLP
1W2Q Chain:A ((16-112))
---------CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20635 for 443 contacts (-46.6/contact) +
2D Compatibility (PS) -7335 + (NN) -2202 + (LL) 448
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -34324.0 ( -77.48 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: