Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCPEVSKALVPCVTYLATGSSFVHCCTQIRLLNSKANTTSDRQGVCRCLTSLAAQFQ---RRHR-----LNFNLVKQLPGKCNVNIRYNITTQNPNCSQVK
2DS2 Chain:B ((9-64))
------------------------QCCNQLRQV--------DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28014 for 254 contacts (-110.3/contact) +
2D Compatibility (PS) -4965 + (NN) -2446 + (LL) 2348
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -36677.0 ( -144.40 by residue)
QMean score : 0.221
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: