Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SEVPTSRGGMSPTQCKEKQR--LLVNACSAVMFGH-----S---------PSSDCCKHVRLTQVQCVCPAITSKLAGLV-------GVEHTIKQIESCGRTVPRNFKCGI
1S6D Chain:A ((6-97))
---------RTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25711 for 479 contacts (-53.7/contact) +
2D Compatibility (PS) -6864 + (NN) 17 + (LL) 264
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -37294.0 ( -77.86 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: