Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSSPDNEALKLAPCAEAAQDQNAAVSASCCDQVRKIGQ--SPSCLCAVMLSNTAKASGIKPEIAITI-PKRCNIANRPVGYKCGPYTLP
1HYP Chain:A ((10-79))
--------------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGR-SYPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30939 for 416 contacts (-74.4/contact) +
2D Compatibility (PS) -6770 + (NN) -1103 + (LL) 556
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -42406.0 ( -101.94 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: