Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTGCGQVVSALAPCIGYATGGAASPSARCCSGVRGLNSAASSPADRKTACTCLKQQTSGMGGIRPDLVAGIPGKCGVNIPYAISPSTDCSKVR
1T12 Chain:A ((1-91))
-AITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62314 for 683 contacts (-91.2/contact) +
2D Compatibility (PS) -9361 + (NN) -1599 + (LL) 260
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -83014.0 ( -121.54 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: