Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEMSCIQNLLPCKPYLPG-TEPPPPVCCLPLKDMVAHQ-AQCLCSALANPDLLKDFNVTMDGALKL-AKTCGASVD-MSVCKNGNH
1HYP Chain:A ((10-78))
-------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA----LGI-LNLNRNLQLILNSCGRSYPSNATCP----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32217 for 381 contacts (-84.6/contact) +
2D Compatibility (PS) -6832 + (NN) -4073 + (LL) 468
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -49054.0 ( -128.75 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: