Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTNVLISMAPCLSYVTGSSS-----T-------PSSSCCSQLASVVLSQPQCLCAALNGG-GASL-G--LNINETLALALPGACKVQTPPVSKCNGKFKNNFLPEI
1S6D Chain:A ((20-102))
---------MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--S-QPCQ-----------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37054 for 440 contacts (-84.2/contact) +
2D Compatibility (PS) -6764 + (NN) -1814 + (LL) 1368
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -50564.0 ( -114.92 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: