Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSSTS------------YPGAQCCSSLTRFRGNPDCLCSTMLTARQQF--T----FSVPNAFTIPERCGYANEIPPHYKCGNYVVGH
1S6D Chain:A ((20-97))
--------MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL--DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM----------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41520 for 393 contacts (-105.6/contact) +
2D Compatibility (PS) -6009 + (NN) -57 + (LL) 272
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -52264.0 ( -132.99 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: