Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNTFM---SVLSCQSATMSEST------------MPSPACCAALRKFHDADCLCQVLLSA-RSAAAIANVPFNLKAALEIPMKCALRTVSAPPGYSCGGMVVPRSPPPTST
1S6D Chain:A ((10-97))
-----GCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL-DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM------------------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52039 for 516 contacts (-100.9/contact) +
2D Compatibility (PS) -7050 + (NN) 266 + (LL) -144
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -64817.0 ( -125.61 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: