Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GCGPKLGVLLPCLPFLQGQGS---------------NPTQPCCNGLETVVKSNPACLCALVNS---Q------L-GNRIN--ITLALSLPSLCNLAGVTIDLCN
1SM7 Chain:A ((14-105))
-------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ--IGTCP
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57027 for 400 contacts (-142.6/contact) +
2D Compatibility (PS) -6394 + (NN) 1683 + (LL) 112
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -66426.0 ( -166.06 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: