Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCGDVATQLAPCINYLRSAGPLPPACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQVN
2ALG Chain:A ((2-92))
ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50503 for 629 contacts (-80.3/contact) +
2D Compatibility (PS) -9455 + (NN) -5069 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -76927.0 ( -122.30 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: