Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPQELSSCFAAFTSSAPPSSTCCSKLKEQKPCLCGYLK---DPNFSQYVNSSKAKRIASTCGVQFPNC
3S1B Chain:A ((1-34))
------------------------------FNKECLLRYKEAALDPNLNLYQRIAKIVSIDDDC-------
General information:
TITO was launched using:
RESULT:
Template:
3S1B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1164 for 136 contacts (-8.6/contact) +
2D Compatibility (PS) -3264 + (NN) -979 + (LL) 1436
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -6921.0 ( -50.89 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_3S1B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S1B-query.scw
PDB file :
Tito_Scwrl_3S1B.pdb
: