Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRNFLIWLLASLFYAYQYILRVIPNIIAPELITKFNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPICVVLTFVGTLPLIYFDEWYYLTFSRIIVGVGSSASAIGIFKIASTYFSQKKSAKMASLSIIVGLLGAIYGGLPLNFLFNKFGWDYVIYAFSTFGCLLALLLFFITPNNSTEKNVSGNVFQDLKTVLFNKHIILISFFSGLMVGPLEGFADGWAKAFLCEVYQMTGDLASLLSSLIFIGMGAGSFFLAYFLERHPNRHYEAIIACSLAMIASFLLLFAQAGGLYVVLPTLLIIGFASGYQVIAIYKAISYVDNSLVGLTTAVSNMIIMVFGYFFHTGIAKIVDLCWDRTVIQGNPVYGSELLIKAISIIPICLLLAVFWFVWLKKRS |
3WDO Chain:A ((34-173)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPL--IVGGLAVFAAGSV-IAALSDSIWGIILGRALQGSGAI-AAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH---------------KLGLHALFWMIAILATTGIALTIWVVPNS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136961 for 962 contacts (-142.4/contact) +
2D Compatibility (PS) -14521 + (NN) -2882 + (LL) 18736
1D Compatibility (HY) -400 + (ID) 550
Total energy: -136578.0 ( -141.97 by residue)
QMean score : 0.173
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