Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFTYTRTALASLLTLCSFSGFAADSFNEGMKGVKKQENIKSITTSEKMEVMKTSNKRLKEKMDRICNADPRKKAEELKKKEELKLAAEKKKEELAEKKRKETKLASEKKAKPLDAKNSNVESSKTRGTETQKARDVKKNFKKDVKIVGQNAEKKGEASPVILVGGVDVIDTNQGTSGLKITFGGVVDAQGYGKAGPSGEDYKHYNVMSGKSTGYYEDISDKVKGANPIFPSGIGNIGDYSEDIDMIADAILHLRAEDKNEDKGLLYGADVQFQVPVTEGKGASQGVRATRGRSAHVFLSSRYGDLKLGYQFGPEALMRLDATRIATIDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKLSFRMAGKYHKNVMTTLPFRFAYYSPNYMGARFGVSYSPRYDSNLFVIKDGDNIKHVGPDYEHIVSAGASYEYDFSERKVKVKVAA---VGEYGQAKEPDSTKYAYKEYVEYNDLMGVNLGISADCNINEDQGVKF--AASFAYLGKSGQPKGIEKLVGNVYQKIDGKGVTDDDKRVKELEDQFKGDDKNTMYWTAGAGYQHENFYISLTYFGSKMS-------DGDKLHDVAFGIQYDLSPASSKGKFVPYASLHYFKTDEKQGGGYKITKKDSSGIAPSNQGVLFLTGMKFSF |
| 3VY8 Chain:X ((52-355)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFGSKIGFKG-QEDLGNGMKAIWQLEQKAS-IAGT-----NSGWGNRQSFIGLKGGFGTVRAGNLNTVLKDSGD-NVNA----------WESGSNTED--------V----LGL------GTI----------GRVESREISVRYDSPVFAGFSGSVQYVPRDNANDVDK------YKHTKSSRESYHAGLKYENA--G--FFGQYAGSFAKYADLNTDAER-VAVNTANAHPVKDYQVHRVVAGYDAN-----DLYVSVAGQYEAAKNNEV-GSI------------------------------KGKKHEQTQVAATAAYRFGNVTPRVSYAHGFKAKVNGVKDANYQYDQVIVGADYDFSKR-----TSALVSAGWLKQGKGA---------------GKVEQTASMVGLRHKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4317 for 2194 contacts (2.0/contact) +
2D Compatibility (PS) -30357 + (NN) -5248 + (LL) 16640
1D Compatibility (HY) 3600 + (ID) 2250
Total energy: -13298.0 ( -6.06 by residue)
QMean score : 0.231
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