Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQNGIQVYKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGKGR
2KJG Chain:A ((1-99))
--MSILEDPEFVKLRQFKGKVNFNLVMQILDEIELDLRGSD----NIKTSIIYVYSSH----LDEIRKNKEFYDMIAEILQRYYKKIGIENVNQLILTTIKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 35614 for 706 contacts (50.4/contact) +
2D Compatibility (PS) -11203 + (NN) -6331 + (LL) 936
1D Compatibility (HY) -3600 + (ID) 400
Total energy: 15016.0 ( 21.27 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_2KJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJG-query.scw
PDB file :
Tito_Scwrl_2KJG.pdb
: