Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MDRLK----KIHWLLVTNVIALFCIGIVVQYSSAGGKWAPFAIHQLVIFSFFFLLAIAMSFIELDFYLKHAYFFYIAAVISLLVVNFFGLYTMGATRWIRIGPISLQPSEFAKVGLILALARYFNKQSVYKMMEFQRLLKALIFIFLPVFLVLKQPNLGTAVIMLFIGASIIFTAIIKRAHLIIYGIISILVIPAIWPSLRSYHKQRILSFLDSSVDPLGIGYNAQQSQIAIGSGGLFGKSFVSGSQTQLGFLPEKHTDFAFAVLSEEWGFLGSMTLIVLYTTLLAIIFSIAYRSKNYFSKLVSIGIFAFFGVHFFINIGMTIGLLPVIGDPLPFLSYGGSTTAASSICIGLLLSSVASMKDLKLKLSISSIERPVV |
| 1I78 Chain:A ((1-297)) | STETLSFTPDNINADISLGTLSGKTKERVYLAEEGG-----------------------RKVSQLDWKFNN-----AAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMD-----SSNPGTWTDEARHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYI-------------------YSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTG-----------------SYRYEDFELGGTFKYSGWVESSDNDEHYDPKGRITYRSKVKDQNYYSVAVNAGYYVTPNAKVYVEG--AWNRVTNKKGNTSLYDHNNNTSDYSKNGAGIENYNFITTAGLKYTF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217110 for 2235 contacts (-97.1/contact) +
2D Compatibility (PS) -31377 + (NN) 2987 + (LL) 7792
1D Compatibility (HY) 7200 + (ID) 2150
Total energy: -232658.0 ( -104.10 by residue)
QMean score : 0.030
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