Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLPILQVIIPIIASMLCFFTRKHKVSWFISFTTTIVTLFISSVLLIKTYNGETITYHLGNWAPPYGIELRIDVLNSLILTLVNFVALISVLYSFYINEKEISKNKITGLYSLFLLCLSGLLGILVTNDIFNLYVFLEISSLSSYVLVSMGKDKKALVAAFEYLISGTIGATFYLLGIGLLYSTTGTLNMSDMAERIVPLYNNNIVKLGTLFIFVGLSNKMALFPLSRWLVNSYSEAPSFVSIFFSGTVTKVMIYVFIRIFYTVFHQNFFLLKLPLSNVII-ILALCAIVFGSIFAITAKDIRRLFAHSSVSQIGYIILVLSLNSKIALSAAILHIINHSI--------IKTSLFMVAGCISYKFGTTKIENLSGLKKSMPYIAFAFTLLSLALVGVPLTNGFISKWYIINVIIESHARISLIVFVVGSFLALIYMWKAVEKMYFESDAVSCVEMTSGKTDVPFPMLFCPLFMATLTLVVGVYSNPIRLVVEKLVF |
4B46 Chain:A ((1-367)) | MKLAMIGF----------GQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLG-------------------------LKNIPKDQRVL---------IGQSRVKGH---------------------------GVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLG---GGTGSGGAPVLAKHLKRIYTEPVYGLGILP---GSDEG------GIYTLNAARSFQTFVRE-----VDNLLVFD-----NDAWRKTGESVQGGYDEINEEIVNRFGVLFGSV--VDSSEIINTLAGGGVSTVGYASEGVTAHTTNRITSLVRKAALGRLTLPCEIEGAERALLVLAG-------PPEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPG---------------------------------------------AEKVAGVILLSGVTNVPRIKELQQVAIEAQD------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -331829 for 2939 contacts (-112.9/contact) +
2D Compatibility (PS) -33813 + (NN) 176 + (LL) 16256
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -359360.0 ( -122.27 by residue)
QMean score : 0.158
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