Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVFLNNATKKIEGEYHQSKETNAPVVLILHHHPQYGGSMDSKMIHSIYTSFIDNNFSALKINFRGVGKSTGTFDKGIGELTDAAIAIDWLQEHNPSNVPIWIVGFSFGAWVAMQLTMRRPEIVGFIALSLPATKYDFSFLSPCPVPGLIIQSSNDTISEESDVTELANRLINSVKSDHMEYHIIGDTNHFLRDKEEEVTQIIDNYVKLRLNSAAISSQMVKKEIRIKEYA
2I3D Chain:A ((24-238))
-PEVIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQPNTYDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEK-LKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRLNGELVPEP------------
General information:
TITO was launched using:
RESULT:
Template:
2I3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166693 for 1908 contacts (-87.4/contact) +
2D Compatibility (PS) -23505 + (NN) -13246 + (LL) 1652
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -225042.0 ( -117.95 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_2I3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I3D-query.scw
PDB file :
Tito_Scwrl_2I3D.pdb
: