Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIYLAIDNVLYAI--NE---TMVMWKKELKS-----LVKGNPTIF---ND--KLAISTL------DDCLYMLDMRMIVQSGPIISPVIMIVTK
3HX6 Chain:A ((163-232))
----------------GKGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEVTGRTGVPN
General information:
TITO was launched using:
RESULT:
Template:
3HX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20399 for 236 contacts (-86.4/contact) +
2D Compatibility (PS) -5157 + (NN) 4594 + (LL) 1440
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -22772.0 ( -96.49 by residue)
QMean score : 0.134
(partial model without unconserved sides chains):
PDB file :
Tito_3HX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HX6-query.scw
PDB file :
Tito_Scwrl_3HX6.pdb
: