Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIFVEKGIVELKDENGTPISHKIIKHNIYPHIENKINVSLMEEDSNGKNLLVKGCCDISTIESLIKME
1T0F Chain:C ((4-52))
-------IKVVKPSDWDSLPDTD---LRYIYSQRQPEKT---MHERLKGKGVIV-------DMASLFKQ-
General information:
TITO was launched using:
RESULT:
Template:
1T0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7024 for 232 contacts (30.3/contact) +
2D Compatibility (PS) -4744 + (NN) 1836 + (LL) 2036
1D Compatibility (HY) -2400 + (ID) 650
Total energy: 3102.0 ( 13.37 by residue)
QMean score : 0.143
(partial model without unconserved sides chains):
PDB file :
Tito_1T0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0F-query.scw
PDB file :
Tito_Scwrl_1T0F.pdb
: