Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEYTLTTNSVEVTVLPVYIEEQSIPYENCYVWMYNVKIKNKSLSTIQLLSRHWQIIDYKGKINEIVGAGVIGEQPVIKPGEVFKYTSGTYLNAPSGIMQGKYEFLNEENTKVFEVTIPSFSLDSPYTNIRPH
2F1E Chain:A ((6-121))
--------RYRVEVEVSPRFLAHQSTPDEGRYAFAYSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSGVLLETEQGQMQGHYDMVAD-DGTEFIAPIAAFVLS---------
General information:
TITO was launched using:
RESULT:
Template:
2F1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47725 for 796 contacts (-60.0/contact) +
2D Compatibility (PS) -12928 + (NN) -5689 + (LL) 1120
1D Compatibility (HY) -5600 + (ID) 2300
Total energy: -73122.0 ( -91.86 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_2F1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F1E-query.scw
PDB file :
Tito_Scwrl_2F1E.pdb
: