Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKIGFLAVFALVISSQIGSGIFMLPISLAPYSTYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYWVISWV-STTALIVVGVGYLTPFLHEEIKNIHLFLELLLFTII---TLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFNRNNFIISKEMSSLTISQILARSTLLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYFINNFAIMGLINGNDLANSRAPYVDAIKIMFSGN------WHLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSP--FWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIKERNYHK-----------LLTGSIATTFCCWVILET-------------SINTLLIASLFTTSGIPLYLFWYRRASAQ----- |
| 4DJK Chain:A ((12-501)) | ---QLTLLGFFAITASMV--MAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDG--WGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHTFFPDFSKVGTLVV-------FVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEI-NLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHFFLHPRARSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -441040 for 3569 contacts (-123.6/contact) +
2D Compatibility (PS) -41351 + (NN) -4710 + (LL) 1120
1D Compatibility (HY) -30400 + (ID) 3100
Total energy: -519481.0 ( -145.55 by residue)
QMean score : 0.300
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