Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSDLWNFFTEVPSEGYIVESSYCTDSGCSNYIGNIDLSNIREFNLVSPDRKITKKFEANIIDFFEPRVHLSMDDSGKKINLDIAPENCSATKDGFLCIDKNEQDYKLKILIKKS
1HBX Chain:G ((7-48))
---TLWQFLLQLLQK------PQN--KHMICWTSN-D----GQFKLLQAEE-VARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYKFVSYPEILNMSRNDYIHSGL
General information:
TITO was launched using:
RESULT:
Template:
1HBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8679 for 223 contacts (-38.9/contact) +
2D Compatibility (PS) -4354 + (NN) 257 + (LL) 1060
1D Compatibility (HY) -3600 + (ID) 350
Total energy: -15666.0 ( -70.25 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1HBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HBX-query.scw
PDB file :
Tito_Scwrl_1HBX.pdb
: