Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKLSYILIVIFISFPILLAASENNEKTQIKDIKCIGNERVGDQTIKFYIKLEPDSYVNDDDIDSIIKSLYKTKLFASVHAYIDNEKK-LVIKVQENPLINKVILKGNKQFKSKELLNNVI---QSKPLTIFTETKLQSDLVNLVTLYRHNGKIGVKVEYELDKLDGNRVNLIFKVKEGKTSRVKSVRFIGNKNFSENELERAIKVQSNDIFNKLFRAIFK-GGNHYSPQYLLTNEELLDRFYSSKGYINNSI-QPIAEID-NNNQIELTFLIDEGQQYLFGSNKVNVEAEIQ-DPDLKEKVLELITKEDNKVFDRVKVSNAVEKINKYLNEIGYIFAKVNPEYTQH--GNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNTSEVQKSRRRLIGSDFFETVKINSYAINDNAVNLDLNVKEKNTTSLYLGGGVSFPGGAFIKTDFKDRNLFGTGKELSFALEKSQYVFSTNVEVVENNFNDSDTSLGVDVFYERQDKPNTTFDSCDWGGIAQLLHKIIENLTNSIRYSYKYNHIHMDNKGGKDEDISEIIRSQQGEYQISSVGYTLAYNKLDNLYAPREGYLLRLSQDISGLGGNMNFLKSEFLSFYTHPILSKIDDDIILRFKMAAGYIFSYTDKELNIGQRFFKGGNEIRGFDLSGIGPRAKDKNKSSLGGKTYFNLTQQVDFPLPKLYDYVGIKGSLFVDYATLFGLDIKKEYEGKYHDSKLVRVSPGFGFSMPSPFGGRFRLDFGFPLAKEPYDIIPSSNIKFSIEVGI |
3EFC Chain:A ((23-349)) | --------------------------GFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLR--DGDTLLVQVKERPTIASITFSGNKSVKDD-MLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDE---VPWW---NVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVS--GNLAGHSAE---IEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80544 for 2205 contacts (-36.5/contact) +
2D Compatibility (PS) -33889 + (NN) -8123 + (LL) 24216
1D Compatibility (HY) -19600 + (ID) 3800
Total energy: -121740.0 ( -55.21 by residue)
QMean score : 0.391
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