Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKSNIIMKVAKRHPLLDRIVIAAIVNRFFEILSSTLEHHNRVEIRGFGSFSIRSYNLKETSHLMLQKFAKNQYFKTYFRSSKKLSDLINE
1B8Z Chain:A ((1-90))
-MNKKELIDRVAKKA-GAKKKDVKLILDTILETITEALAKGEKVQIVGFGSFEV----------------------VPKFKPGKALKEKVK-
General information:
TITO was launched using:
RESULT:
Template:
1B8Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27875 for 358 contacts (-77.9/contact) +
2D Compatibility (PS) -7099 + (NN) -1664 + (LL) 2016
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -39522.0 ( -110.40 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1B8Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B8Z-query.scw
PDB file :
Tito_Scwrl_1B8Z.pdb
: