Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEFKSIRNIAIIAHVDHGKTTLLDNMLKQSGTFRENQEVQERVMDSGNQERERGITILAKCTSIMWGDEKINIIDTPGHADFGGEVERVLCMVDGVLLLVDAAEGPMPQTKFVLSKALKADLKSIVIINKVDRPDSRIDEVLNEIYELFFNLDATNEQLDFPVLYASGRNGWCIKELSDKRKDLSPLFSTVIDYIKPANYDRNAPFAMLVTLLESDKFLGRILTGKIYQGIAKVNSDLKVLDLDGKVIKRGRLTKLLSFSGLKRIPVEQAVAGDIIAIAGLEKASVSATIVAPEVTTAISSTPVDPPTMAITLSVNDSPFAGQEGTKLTSAIIKDRLYAEAEINVAITVTPTPNDEAFEVGGRGELQLGVLIENMRREGFELSVSRPRVLFKEEGGKKLEPIEEVVIDVDDEYSGIIMKKLSFRKGEVTDMRPSGSGRTRLIFLVPSRGLIGYQGEFLTDSRGTGIINRLFHSYAPYK-GPISRRRNGVLISTDKGEAVAYAIFNLQDRGIMFIKPQDRVYCGMVVGQHSRDNDLEINVLKGKQLTNVRAAGSDEAIKLTPPKTMTLEDMIAYIDDDELVEVTPKSIRLRKKFLDPNERRRAEKAKNKE |
4ZCM Chain:B ((36-635)) | ---IEKLRNIAIIAHVDHGKTTLVDKLLQQSG------------------------TILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEGKT-RNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLT----------------VLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRAN------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -284417 for 4588 contacts (-62.0/contact) +
2D Compatibility (PS) -59745 + (NN) -20726 + (LL) 3364
1D Compatibility (HY) -51200 + (ID) 14350
Total energy: -427074.0 ( -93.09 by residue)
QMean score : 0.523
|
|
|