Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEKDSNFAMEKPGNNYVG-CISSENGECKNFY--------DLKLNFVKYNSGNNSSLYPYYYNLENFGNFLEVDVKLRELIGLKKGLKD
1UGL Chain:A ((1-50))
-----NLMKRCTRGFRKLGKCTTLEEEKCKTLYPRGQCTCSDSKMNTHSCDCKSC-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6354 for 226 contacts (28.1/contact) +
2D Compatibility (PS) -4490 + (NN) -299 + (LL) 2420
1D Compatibility (HY) -800 + (ID) 500
Total energy: 2685.0 ( 11.88 by residue)
QMean score : 0.069
(partial model without unconserved sides chains):
PDB file :
Tito_1UGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UGL-query.scw
PDB file :
Tito_Scwrl_1UGL.pdb
: