Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLSQYYLPTLKEKPAHARIISHQYSLRAGLIKQIASGIYTWLPLGLRVLKNIEGIIRDEMNKSGAIEALMPCVQPASLWRESGRYDDYGKTMLRIRDRHEEDMLFGPTHEEVATDLIRDIVKSYKNLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFNVNYESALNSYNLMYKTYIKIFKRMGLIPIGVRADTGLIGGNLSHEFHILASTGESTLYYDNKFFELLESED-----------VKSLKSIYAVADDIHDPK--TCPVPQEQLNVSKGIEIGHIFYFGDKYSKPMNAKVTAQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKTAEYVEIANKIYSTL--KSDEVLYDDTEGSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEIKNRATGKVEEVQIEEAINYFNVK |
2I4O Chain:C ((21-454)) | MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARLT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268780 for 3505 contacts (-76.7/contact) +
2D Compatibility (PS) -44571 + (NN) -14266 + (LL) 12
1D Compatibility (HY) -40800 + (ID) 11700
Total energy: -380105.0 ( -108.45 by residue)
QMean score : 0.530
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