Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALG-GFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
5CXD Chain:C ((4-120))
MIHGIGVDLIEIDRIQALYSKQ-PKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDIDCYNDELGKPKID------YEGFIVHVSISHTEHYAMSQVVLEKSAF
General information:
TITO was launched using:
RESULT:
Template:
5CXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75817 for 809 contacts (-93.7/contact) +
2D Compatibility (PS) -13212 + (NN) -7073 + (LL) 312
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -107490.0 ( -132.87 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_5CXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CXD-query.scw
PDB file :
Tito_Scwrl_5CXD.pdb
: