Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRER-KVNISDAYVTEKNGEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYF-NDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
1P6V Chain:C ((9-130))
---IAENKEAKAKYDILETYEAGIVLKGSEVKSLREKGTVSFKDSFVRIENGEAWLYNLYIAPYKHA---NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNK--VKVLIALAKGKKL------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64765 for 828 contacts (-78.2/contact) +
2D Compatibility (PS) -12282 + (NN) 2520 + (LL) 2208
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -88419.0 ( -106.79 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_1P6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P6V-query.scw
PDB file :
Tito_Scwrl_1P6V.pdb
: