Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEKSKEIGKAFSNKVVEISIIRSISVTSDEQEFSFKLRLLTIVDKDTHSIWILR
2EQP Chain:A ((1-50))
-GSSGSSGEQAPGTAPCSRG-SSWSADLDKCMDCASCRARPHSDFCLGCAAA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2EQP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13290 for 257 contacts (51.7/contact) +
2D Compatibility (PS) -4965 + (NN) 387 + (LL) 2640
1D Compatibility (HY) 0 + (ID) 200
Total energy: 11152.0 ( 43.39 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_2EQP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQP-query.scw
PDB file :
Tito_Scwrl_2EQP.pdb
: