Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQQEMITINAELRDVTKTKAIRSLRKKGNIPAVVYGKGHNNVNLTLSAKEFTKQYKLGFLSAHVIELDIS-GKKEYALVRDIQWHVVKDTIQHVDFQFVDKGSEIKIDIPLSFVNESKSPGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISDVKLPGGVKLAAHEEENFTVVTISAADSGVEESQVETTEE
1FEU Chain:D ((17-175))
-----------------------ALRRAGKLPGLMYNR-HLNRKVYVDLVEFDKVFRQASIH-HVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDF-FVLSDEPVEMYVPLRFVGTPA--GVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVVPPEDVEKLAEEAAA----
General information:
TITO was launched using:
RESULT:
Template:
1FEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90646 for 1098 contacts (-82.6/contact) +
2D Compatibility (PS) -16900 + (NN) -2508 + (LL) 2900
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -123904.0 ( -112.85 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_1FEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FEU-query.scw
PDB file :
Tito_Scwrl_1FEU.pdb
: