Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLALPALFLWLLNWTLVKEIWRFNDLMQEAPE--EERQLIIYRLVDTLPFITQTTYDLSAVASVNLSVNKLIEKYGENLSKDGFYTQLNRENTTNIEGYIKQSNEFKAEEKSHALKCLGFINRIEDKFQDNCSKLTLKQADILY |
3G80 Chain:A ((8-55)) | ------------------------YELIKSLPAKLEQLAQETQATIQTLM--IA---DPNVN--------KDLRAFCEFLTVQHQRAYRATNSLLIKPRVAAALRGE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1252 for 211 contacts (-5.9/contact) +
2D Compatibility (PS) -5053 + (NN) -3364 + (LL) 6556
1D Compatibility (HY) 800 + (ID) 450
Total energy: -2763.0 ( -13.09 by residue)
QMean score : 0.367
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