Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIIGNASKELGKLIANKLNVQPFSAQVSKFADGAINAEVESNLCSQEVYIIQSISPPVNDHLMELLFIIDAVKRSGTKRITTIIPYYGYSRQDRIIKNNNMQSALNAKLVANLIQTAGASSVAVIDLHSSQIEGFFDVPLTNLSCFEAFADSIHIEN---LAIVAPDVGAIGRARAFAKTLEKKYEIKLSDKIIIIDKYREKAGTSHVMNVIGEATNKNCVIVDDIVDSGGTLCNAALALKNRRARSVISCITHGVLSGNAIEKISSSSLDKLVTTDTIFHKLEK--TDKIEIVSIANILTHFIQGGKDAS
3DAH Chain:C ((8-301))
LMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAGRITAAIPYFGYARQDR--RPRSARVAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYPDLLVVSPDVGGVVRARALAK--------QLNCDLAIIDKRR-------VMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAETFSRIRRGD
General information:
TITO was launched using:
RESULT:
Template:
3DAH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -236158 for 2337 contacts (-101.1/contact) +
2D Compatibility (PS) -31351 + (NN) -17392 + (LL) 1476
1D Compatibility (HY) -24400 + (ID) 6250
Total energy: -314075.0 ( -134.39 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3DAH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DAH-query.scw
PDB file :
Tito_Scwrl_3DAH.pdb
: