Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEVSNSFDEIKVFIEQKKEILKYIVSWLKEDKQENFLKEFEQIQIDFSEKAKRLTSLAMKKLKILTIADLNLAVISQNQYMKISYKSVISRNSVHIMLIKKNSDNSFAFYDPNLWCSF
4IRN Chain:D ((316-352))
-QLVANKLVEMKLRLENAKAYL-YKVAWMKENKQMALLE--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IRN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5474 for 149 contacts (36.7/contact) +
2D Compatibility (PS) -3902 + (NN) -1748 + (LL) 7096
1D Compatibility (HY) -4400 + (ID) 800
Total energy: 1720.0 ( 11.54 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_4IRN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IRN-query.scw
PDB file :
Tito_Scwrl_4IRN.pdb
: