Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHIPVLLKEMLLQLSPQNGGIYVDATFGAGGYSKAILESA-D-CKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGERHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
3TKA Chain:A ((42-346)) | ---TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDD---PRFSIIHGPFSALGEYVAERD----------------------------------L--IGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVK----HPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRG-------RQLRALGKLMPGEEEVAENPRARSSVLRIAERTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138710 for 2389 contacts (-58.1/contact) +
2D Compatibility (PS) -30618 + (NN) -11558 + (LL) 3364
1D Compatibility (HY) -19600 + (ID) 5750
Total energy: -202872.0 ( -84.92 by residue)
QMean score : 0.510
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