Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKIIEIRAPKTLGGESITEGVIKIKKSIGEAIEVDDLIFEIETDKTALELTAEASGQITEFLVSEGDVISPDQLLAKLSVGEVKKEDKSENLAKRDAPSARKIMEENAISTESVKGTGMGSRITKADVIDHMRKAEQPTIKQYELPKSAASGERREERVKMSKIRQVIAARLKASQNTAAILTTFNEIDMKNVIDLRAKYKETFEKKYGIKLGFMSFFIKAAVQALREIPEINAEISGDEIIYKRYYDIGVAVGTNKGLVVPAIRNADQMSFAEIELTLADLGKKAREGKLQVSEMEDATFTISNGGVYGSLLSTPIINPPQSGILGMHSIQNRPFAVGNSIEIRPMMYIALSYDHRIIDGKGAVTFLVKIKNYIEDPNRLVLEV |
1C4T Chain:C ((2-232)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------RSEKRVP----RKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLR--YGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDG--VVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125006 for 1680 contacts (-74.4/contact) +
2D Compatibility (PS) -23992 + (NN) -9240 + (LL) 11676
1D Compatibility (HY) -29600 + (ID) 6150
Total energy: -182312.0 ( -108.52 by residue)
QMean score : 0.459
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